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Phase field models and simulations of vesicle bio-membranes, Ph.D
thesis, Pennsylvania State University, 2005.
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A Phase Field Approach
in the Numerical Study of the Elastic Bending Energy for Vesicle Membranes,
with Qiang Du and Chun Liu, Journal of Computational Physics, 198,
pp. 450-468, 2004
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Tessellation and Clustering by Mixture Models and Their Parallel
Implementations, with Qiang Du, Proceeding of the fourth SIAM
international conference on Data Mining, (regular paper), Orlando, FL,
2004, SIAM, pp257-268.
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Centroidal Voronoi tessellation based algorithms for vector fields
visualization and segmentation, with Qiang Du, IEEE Proceedings of
Visualization 2004 (VIS2004), (regular paper), Austin, Texas, pp43-50,
2004
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A phase field
formulation of the Willmore problem, with Qiang Du, Chun Liu and Rolf Ryham, Nonlinearity,
18, pp. 1249-1267, 2005
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Modeling the Spontaneous Curvature Effects in Static Cell Membrane
Deformations by a Phase Field Formulation, with Qiang Du, Chun
Liu and Rolf Ryham, Communications in Pure and
Applied Analysis, 4, pp. 537-548, 2005
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Retrieving
topological information for phase field models, with Qiang Du and Chun
Liu, SIAM Journal on Applied Mathematics, 65, pp. 1913-1932, 2005
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Ideal
point distributions, best mode selections and optimal spatial partitions via
centroidal Voronoi tessellations, with Qiang Du,
Maria Emelianenko and Hyung-Chun Lee, Proceedings of 2nd Inter Symposium on
Voronoi Diagrams in Sciences and Engineering (refereed), Seoul,
Korea, Oct 2005 (VD2005), pp. 325-333, 2005
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Simulating
the Deformation of Vesicle Membranes under Elastic Bending Energy in Three
Dimensions, with Qiang Du and Chun Liu, Journal of Computational Physics,
212, pp. 757-777, 2006
- Centroidal
Voronoi Tessellation Algorithms for Image Compression, Segmentation, and
Multichannel Restoration, with Qiang Du, Max Gunzburger and Lili Ju, Journal of
Mathematical Imaging and Vision, 2006, Volume 24, Issue 2, pp 177-194
- Convergence of numerical
approximations to a phase field bending elasticity model of membrane
deformations, with Qiang Du, International Journal of Numerical Analysis
and Modelling, Vol. 4, Number 3-4, pp. 441-459, 2007
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Diffuse Interface Energies
Capturing the Euler Number: Relaxation and Renomalization, with Qiang Du, Chun Liu and Rolf Ryham,
Comm.
Math. Sci., 2007, Volume 5, Issue 1, pages 233-242
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Modeling and Simulations of
Multi-component Lipid Membranes and Open Membranes via Diffusive Interface
Approaches, with Qiang Du, Journal of Mathematical Biology, 56, no3,
pp.347-371, 2008
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Asymptotic Analysis of Phase
Field Formulations of Bending Elasticity Models, SIAM Mathematical Analysis,
Vol. 39, No. 5, pp. 1367- 1401, 2008
- An Edge-Weighted Centroidal Voronoi Tessellation Model For Image
Segmentation, with Jie Wang and Lili Ju, IEEE Transactions on Image
Processing, Vol. 18, pp. 1844 - 1858, 2009.
- Diffusive Interface Model for
Actomyosin Driven Cell Oscillations, submitted to Discrete and Continuous
Dynamical Systems - Series B, 2009
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Energetic variational approaches in modeling
vesicle and fluid interactions, with Qiang Du, Chun Liu and Rolf Ryham,
Physica D, 238, pp.923-930, 2009
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Edge-Weighted Centroidal Voronoi Tessellations,
with Jie Wang, Numerical Mathematics: Theory, Methods And Applications, Vol.
3, no. 2, pp. 223-244, 2010.
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Image segmentation using local variation and edge-weighted centroidal Voronoi
tessellations, with
Jie Wang and Lili Ju,
IEEE Transactions on Image Processing,
Vol. 20,
pp. 3242-3256, 2011;
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VCells:
Simple and Efficient Superpixels Using Edge-Weighted Centroidal Voronoi
Tessellations, with Jie Wang, Pattern Analysis and Machine Intelligence,
IEEE
Transactions on 34.6 pp. 1241-1247. 2012.
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Generalized edge-weighted centroidal Voronoi tessellations for geometry
smoothing,
with Yu Wang, Lili Ju and Desheng Wang,
Computers & Mathematics with Applications,
Vol. 64,
pp. 2663-2681, 2012;
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Simulating Vesicle-Substrate Adhesion Using Two Phase Field Functions, with
Rui Gu and Max Gunzburger, Journal of Computational Physics, 275, pp.
626-641, 2014
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New Asymptotic Analysis Method for Phase Field Models in Moving Boundary
Problem with Surface Tension, with Jie Wang,
Discrete
& Continuous Dynamical Systems - Series B
. Vol. 204 Issue 9, p3185-3213. 2015.
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A Two Phase Field Model for
Tracking Vesicle-Vesicle Adhesion, with Rui Gu and Max Gunzburger, submitted
to Journal of Mathematical Biology, 2015.
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A fuzzy edge-weighted
centroidal Voronoi tessellation model for image segmentation, with Xiaochuan
Fan, Lili Ju, and Song Wang, Computers & Mathematics with Applications,
to appear, 2015
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Efficient and Stable
Exponential Time Differencing Runge-Kutta Methods for Phase Field Elastic
Bending Energy Models, with Lili Ju and Qiang Du, submitted to Journal of
Computational Physics, 2015